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Package 1/62HostnameOS / ArchBUILDCHECKBUILD BIN
affydata 1.11.3
Laurent
Snapshot Date: 2009-01-09 00:04:58 -0800 (Fri, 09 Jan 2009)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/affydata
Last Changed Rev: 410 / Revision: 745
Last Changed Date: 2007-08-07 18:27:33 -0700 (Tue, 07 Aug 2007)
wilson2 Linux (openSUSE 10.3) / x86_64  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: affydata
Version: 1.11.3
Command: /home/biocbuild/bbs-2.3-bioc/R/bin/R CMD check --no-vignettes affydata_1.11.3.tar.gz
StartedAt: 2009-01-09 01:20:26 -0800 (Fri, 09 Jan 2009)
EndedAt: 2009-01-09 01:21:09 -0800 (Fri, 09 Jan 2009)
EllapsedTime: 43.1 seconds
RetCode: 0
Status: OK
CheckDir: affydata.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.3-data-experiment/meat/affydata.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'affydata/DESCRIPTION' ... OK
* this is package 'affydata' version '1.11.3'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'affydata' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating affydata-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating affydata-manual.tex ... OK
* checking affydata-manual.tex using pdflatex ... OK

affydata.Rcheck/00install.out:

* Installing *source* package 'affydata' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
 >>> Building/Updating help pages for package 'affydata'
     Formats: text html latex example 
  Dilution                          text    html    latex
** building package indices ...
* DONE (affydata)