LVS normalization for Agilent miRNA data

Documentation for package ‘LVSmiRNA’ version 1.0.0

DESCRIPTION file.
Overview of user guides and package vignettes; browse directory.
Package NEWS.

Help Pages

boxplot-method	Methods for Function boxplot
boxplot-methods	Methods for Function boxplot
estVC	Robust Linear Model to Estimate Residual Variance and Array Effect
estVC.EList	Robust Linear Model to Estimate Residual Variance and Array Effect
estVC.RGList	Robust Linear Model to Estimate Residual Variance and Array Effect
exprs-method	Methods for Function exprs
exprs-methods	Methods for Function exprs
exprs<--method	~~ Methods for Function exprs<- in Package 'Biobase' ~~
exprs<--methods	~~ Methods for Function exprs<- in Package 'Biobase' ~~
featureNames-method	Methods for Function featureNames
featureNames-methods	Methods for Function featureNames
lvs	Least Variant Set selection and Normalization Function(s)
lvs.EList	Least Variant Set selection and Normalization Function(s)
lvs.RGList	Least Variant Set selection and Normalization Function(s)
MIR	Data example
MIR-spike-in	Data example
MIR.RA	Data example
MIR_RA	Data example
normalize.lvs	Least Variant Set selection and Normalization Function(s)
plot-method	Plot of Residual Variance and Array Effect
preproc-method	Methods for Function preproc
preproc-methods	Methods for Function preproc
preproc<--method	Methods for Function preproc
preproc<--methods	Methods for Function preproc
probeNames-method	Methods for Function probeNames
probeNames-methods	Methods for Function probeNames
read.mir	Read in miRNA Data from Agilent Feature Extractiion Output Files
RLM	Robust Fitting of Linear Models
rlmFit	Fitter Functions for Robust Linear Models
sampleNames-method	Methods for Function sampleNames
sampleNames-methods	Methods for Function sampleNames
summarize	LVSmiRNA Summarization Function(s) for microRNA Microarray
summarize.EList	LVSmiRNA Summarization Function(s) for microRNA Microarray
summarize.RGList	LVSmiRNA Summarization Function(s) for microRNA Microarray