The Bioconductor Project: Open-source Statistical Software for the Analysis of Microarray Data

Sandrine Dudoit
Division of Biostatistics, University of California, Berkeley

EMBO Practical Course on Analysis and Informatics of Microarray Data
Wellcome Trust Genome Campus, Hinxton
Cambridge, UK
March 18, 2003

Lecture notes

Overview of Bioconductor software, annotation, pre-processing: .pdf
Supplement on differential gene expression, clustering, classification: .pdf

Lab materials

Lab1 R and Bioconductor Basics
.R
Lab2 Introduction to Bioconductor Annotation Packages
.R
Lab3 Introduction to Bioconductor marray Packages
.R
Lab4 Introduction to Bioconductor affy Package
.R
Fred Hutchinson Cancer Research Center