RELEASE HISTORY OF HTSFilter PACKAGE
             ========================================

	CHANGES in HTSFilter VERSION 0.99.3-0.99.8

-- Fixed minor bugs in HTSBasicFilter function for rpkm calculation
-- Minor changes to vignette

	CHANGES in HTSFilter VERSION 0.99.2

-- Small updates to vignette, fixed small bug in HTSBasicFilter function and doc

		CHANGES in HTSFilter VERSION 0.99.1

-- Vignette updated
-- New method HTSBasicFilter for all classes handled by HTSFilter
-- Made normalizeData a visible function
-- Changes to dependencies (include classes and methods for DESeq, include
additional classes for edgeR pipeline: DGEExact, DGEGLM, DGELRT)
-- Slight changes/additions to man pages and citation info (paper in revision)
-- Inclusion of methods for CountDataSet S4 objects
-- Inclusion of methods for additional edgeR objects: DGEList, DGEExact,
DGEGLM, and DGELRT now supported
-- Minor change in .perConditionSimilarityIndex() to use mean rather than sum
(in case of unbalanced experiments)

		CHANGES in HTSFilter VERSION 0.99.0

-- Version bumped for submission to Bioconductor.

		CHANGES in HTSFilter VERSION 0.1.1

-- Some additional documentation about the HTSFilter output
-- Small changes to vignette: typos, name changed to HTSFilter.pdf to 
   allow calls to vignette("HTSFilter"), added .onAttach function to
   zzz.R to add HTSFilter vignette to Windows toolbar.
-- Added HTSFilter method for signature "data.frame"

		CHANGES in HTSFilter VERSION 0.1.0

This is the first release (29 October 2012).