CHANGES IN VERSION 1.0.1
-------------------------

NEW FEATURES

    o add support of direct input of sojourn parameters as named list.
    
BUG FIXES

    o suppress warnings generated when appending GRanges object for the output
    o fix redundant @+ in the ylab for - strand

CHANGES IN VERSION 0.99.3
-------------------------

NEW FEATURES

    o add mvt and t to the emis.type and tmvtFit function

BUG FIXES

    o fix shift index (-1) in pois and nbinom fitting	    

CHANGES IN VERSION 0.99.2
-------------------------

NEW FEATURES

    o add log-Vertibi in c
    
    o add normalizing factor for estimation of emis$p and soj$d

    o add avgFunc to be used in average calculation, median and mean with trim, default to median

BUG FIXES

    o fix shift index (-1) in pois and nbinom fitting	
	
CHANGES IN VERSION 0.99.1
-------------------------

NEW FEATURES

    o in Bioc-devel