annotate

Annotation for microarrays

Using R enviroments for annotation.

Author R. Gentleman
Maintainer Biocore Team c/o BioC user list

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("annotate")

Vignettes (Documentation)

Package Downloads
GOusage.pdf
annotate.pdf
chromLoc.pdf
prettyOutput.pdf
query.pdf
useDataPkgs.pdf
useHomology.pdf
useProbeInfo.pdf
Package source annotate_1.20.1.tar.gz
Windows binary annotate_1.20.1.zip
MacOS X 10.4 (Tiger) binary annotate_1.20.1.tgz
MacOS X 10.5 (Leopard) binary annotate_1.20.1.tgz

Details

biocViews
Annotation , Pathways , GO , Affymetrix
Depends
R , methods , Biobase , AnnotationDbi , xtable
Suggests
hgu95av2.db , genefilter , Biostrings , rae230a.db , rae230aprobe , tkWidgets , XML , GO.db , org.Hs.eg.db , org.Mm.eg.db , hom.Hs.inp.db
Imports
methods , AnnotationDbi
SystemRequirements
License Artistic-2.0
URL
dependsOnMe
Agi4x44PreProcess , AnnBuilder , Category , GOstats , GSEABase , MLInterfaces , RpsiXML , SAGElyzer , affycoretools , codelink , geneplotter , idiogram , lumi , macat , ontoTools , safe , splicegear
suggestsMe
BiocCaseStudies , GSEAlm , biomaRt , geneplotter , maigesPack , oneChannelGUI , puma , siggenes