exonmap

High level analysis of Affymetrix exon array data

Provides fine grained annotation of Affymetrix exon arrays, including mappings between the array probes and probesets and the Ensembl exons, transcripts and genes they target.

Author	Crispin J Miller Michal Okoniewski, Tim Yates
Maintainer	Crispin Miller

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("exonmap")

Vignettes (Documentation)

Package Downloads

INSTALL.pdf

exonmap.example.pdf

exonmap.pdf

Package source	exonmap_2.0.0.tar.gz
Windows binary	exonmap_2.0.0.zip
MacOS X 10.4 (Tiger) binary	exonmap_2.0.0.tgz
MacOS X 10.5 (Leopard) binary	exonmap_2.0.0.tgz

Details

biocViews	Microarray , OneChannel , Preprocessing , Transcription , DataImport , Statistics , DifferentialExpression , Annotation , ReportWriting , Visualization
Depends	R , affy , genefilter , RColorBrewer , RMySQL , DBI , methods
Suggests
Imports
SystemRequirements
License	GPL version 2 or later
URL	http://www.bioconductor.org, http://bioinformatics.picr.man.ac.uk
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