CNTools

Convert segment data into a region by sample matrix to allow for other high level computational analyses.

This package provides tools to convert the output of segmentation analysis using DNAcopy to a matrix structure with overlapping segments as rows and samples as columns so that other computational analyses can be applied to segmented data

Author Jianhua Zhang
Maintainer J. Zhang

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("CNTools")

Documentation

NCTools HowTo PDF R Script
Reference Manual

Details

biocViews
Depends
methods , stats , genefilter
Imports
Suggests
System Requirements
License LGPL
URL
Depends On Me
Imports Me
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Package Downloads

Package source CNTools_1.2.0.tar.gz
Windows binary CNTools_1.2.0.zip
MacOS X 10.4 (Tiger) binary CNTools_1.2.0.tgz
MacOS X 10.5 (Leopard) binary CNTools_1.2.0.tgz
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