Function	Description
class.factor.format	A function for creating a factor from the phenoData slot of an exprSet
ClassifierBuild	Building a classifier as a combination of preprocessing and classification method
important.variable.names	Writing tables with variable information
intersectList	A function for creating a all possible intersects for a list of sets.
MCRconfusion	Summary tables for MCRestimate objects
MCRestimate	Estimation of misclassification error by cross-validation
MCRestimateMerge	Merging objects of class MCRestimate
plot.MCRestimate	Plot method for a objects of class MCRestimate
PLR	A function which performs penalised logistic regression classification for two groups
plr.fit	internally functions used by PLR.
replace.NA	Replaces in a given numeric matrix NA values per row or per column.
RF.wrap	Wrapper function for different classification methods
select.NA.elements	Selects NA values of a given numeric matrix
SVM.OVA.wrap	SVM with 'One-Versus-All' multiclass approach
varSel.highest.var.eSRG	Variable selection and cluster functions
whatiscorrect	internally used function