MIMOSA

Mixture Models for Single-Cell Assays

Bioconductor version: Development (3.0)

Modeling count data using Dirichlet-multinomial and beta-binomial mixtures with applications to single-cell assays.

Author: Greg Finak <gfinak at fhcrc.org>

Maintainer: Greg Finak <gfinak at fhcrc.org>

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MIMOSA")

Citation (from within R, enter citation("MIMOSA")):

Documentation

PDF R Script MIMOSA: Mixture Models For Single Cell Assays
PDF   Reference Manual
Text   NEWS

Details

biocViews CellBasedAssays, FlowCytometry, Software
Version 1.1.0
In Bioconductor since BioC 2.14 (R-3.1)
License Artistic-2.0
Depends R (>= 3.0.2), MASS, plyr, reshape, Biobase, ggplot2
Imports methods, Formula, data.table, pracma, MCMCpack, coda, modeest, ggplot2, reshape, plyr, Biobase, MASS, testthat, Rcpp
Suggests parallel, knitr
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source MIMOSA_1.1.0.tar.gz
Windows Binary MIMOSA_1.1.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) MIMOSA_1.1.0.tgz
Mac OS X 10.9 (Mavericks) MIMOSA_1.1.0.tgz
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