ProCoNA

Protein co-expression network analysis (ProCoNA).

Bioconductor version: Development (3.0)

Protein co-expression network construction using peptide level data, with statisical analysis. (Journal of Clinical Bioinformatics 2013, 3:11 doi:10.1186/2043-9113-3-11)

Author: David L Gibbs

Maintainer: David L Gibbs <gibbsd at ohsu.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("ProCoNA")

To cite this package in a publication, start R and enter:

    citation("ProCoNA")

Documentation

PDF R Script De Novo Peptide Network Example
PDF   Reference Manual
Text   README
Text   NEWS

Details

biocViews GraphAndNetwork, Proteomics, Software
Version 1.3.0
In Bioconductor since BioC 2.13 (R-3.0)
License GPL (>= 2)
Depends R (>= 2.10), methods, WGCNA, MSnbase
Imports BiocGenerics, GOstats
Suggests RUnit
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source ProCoNA_1.3.0.tar.gz
Windows Binary ProCoNA_1.3.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) ProCoNA_1.3.0.tgz
Mac OS X 10.9 (Mavericks)
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