To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SQUADD")

In most cases, you don't need to download the package archive at all.

SQUADD

 

   

This is the development version of SQUADD; for the stable release version, see SQUADD.

Add-on of the SQUAD Software

Bioconductor version: Development (3.4)

This package SQUADD is a SQUAD add-on. It permits to generate SQUAD simulation matrix, prediction Heat-Map and Correlation Circle from PCA analysis.

Author: Martial Sankar, supervised by Christian Hardtke and Ioannis Xenarios

Maintainer: Martial Sankar <martial.sankar at unil.ch>

Citation (from within R, enter citation("SQUADD")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SQUADD")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SQUADD")

 

PDF SQUADD package
PDF SQUADD package
PDF   Reference Manual

Details

biocViews GraphAndNetwork, Network, Software, Visualization
Version 1.23.0
In Bioconductor since BioC 2.7 (R-2.12) (6 years)
License GPL (>=2)
Depends R (>= 2.11.0)
Imports graphics, grDevices, methods, RColorBrewer, stats, utils
LinkingTo
Suggests
SystemRequirements
Enhances
URL http://www.unil.ch/dbmv/page21142_en.html
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source SQUADD_1.23.0.tar.gz
Windows Binary SQUADD_1.23.0.zip
Mac OS X 10.9 (Mavericks) SQUADD_1.23.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/SQUADD
Package Short Url http://bioconductor.org/packages/SQUADD/
Package Downloads Report Download Stats

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