Analysis of amplicon enrichment panels

Bioconductor version: Development (3.0)

The package provides tools and reports for the analysis of amplicon sequencing panels, such as AmpliSeq

Author: Alicja Szabelska <alicja.szabelska at>; Marek Wiewiorka <marek.wiewiorka at>; Michal Okoniewski <michal at>

Maintainer: Michal Okoniewski <michal at>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF R Script ampliQueso primer
PDF   Reference Manual
Text   NEWS


biocViews DifferentialExpression, GeneExpression, RNASeq, ReportWriting, Sequencing, Software, Transcription, Visualization
Version 1.3.0
In Bioconductor since BioC 2.13 (R-3.0)
License GPL-2
Depends R (>= 2.15.0), rnaSeqMap(>= 2.17.1), knitr, rgl, ggplot2, gplots, parallel, doParallel, foreach, VariantAnnotation, genefilter, statmod, xtable
Imports edgeR, DESeq, samr
System Requirements
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source ampliQueso_1.3.0.tar.gz
Windows Binary (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) ampliQueso_1.3.0.tgz
Mac OS X 10.9 (Mavericks)
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