drawProteins

DOI: 10.18129/B9.bioc.drawProteins    

This is the development version of drawProteins; for the stable release version, see drawProteins.

Package to Draw Protein Schematics from Uniprot API output

Bioconductor version: Development (3.9)

This package draws protein schematics from Uniprot API output. From the JSON returned by the GET command, it creates a dataframe from the Uniprot Features API. This dataframe can then be used by geoms based on ggplot2 and base R to draw protein schematics.

Author: Paul Brennan [aut, cre]

Maintainer: Paul Brennan <brennanpincardiff at gmail.com>

Citation (from within R, enter citation("drawProteins")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("drawProteins", version = "3.9")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("drawProteins")

 

HTML R Script Using drawProteins
HTML R Script Using drawProteins
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews FunctionalPrediction, Proteomics, Software, Visualization
Version 1.3.0
License MIT + file LICENSE
Depends R (>= 3.4)
Imports ggplot2, httr, dplyr, readr, stringr
LinkingTo
Suggests covr, testthat, knitr, rmarkdown, BiocStyle
SystemRequirements
Enhances
URL https://github.com/brennanpincardiff/drawProteins
BugReports https://github.com/brennanpincardiff/drawProteins/issues/new
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package drawProteins_1.3.0.tar.gz
Windows Binary drawProteins_1.3.0.zip
Mac OS X 10.11 (El Capitan) drawProteins_1.3.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/drawProteins
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/drawProteins
Package Short Url http://bioconductor.org/packages/drawProteins/
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