nudge

Normal Uniform Differential Gene Expression detection

Bioconductor version: Development (3.0)

Package for normalizing microarray data in single and multiple replicate experiments and fitting a normal-uniform mixture to detect differentially expressed genes in the cases where the two samples are being compared directly or indirectly (via a common reference sample)

Author: N. Dean <nemad at stat.washington.edu> and A. E. Raftery <raftery at stat.washington.edu>

Maintainer: N. Dean <nemad at stat.washington.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("nudge")

To cite this package in a publication, start R and enter:

    citation("nudge")

Documentation

PDF R Script nudge Overview
PDF   Reference Manual

Details

biocViews DifferentialExpression, Microarray, Software, TwoChannel
Version 1.31.0
In Bioconductor since BioC 1.8 (R-2.3)
License GPL-2
Depends
Imports stats
Suggests
System Requirements
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Package Downloads

Package Source nudge_1.31.0.tar.gz
Windows Binary nudge_1.31.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) nudge_1.31.0.tgz
Mac OS X 10.9 (Mavericks)
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