To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("simulatorZ")

In most cases, you don't need to download the package archive at all.

simulatorZ

DOI: 10.18129/B9.bioc.simulatorZ    

This is the development version of simulatorZ; for the stable release version, see simulatorZ.

Simulator for Collections of Independent Genomic Data Sets

Bioconductor version: Development (3.6)

simulatorZ is a package intended primarily to simulate collections of independent genomic data sets, as well as performing training and validation with predicting algorithms. It supports ExpressionSet and RangedSummarizedExperiment objects.

Author: Yuqing Zhang, Christoph Bernau, Levi Waldron

Maintainer: Yuqing Zhang <zhangyuqing.pkusms at gmail.com>

Citation (from within R, enter citation("simulatorZ")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("simulatorZ")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("simulatorZ")

 

PDF R Script SimulatorZ
PDF   Reference Manual
Text   NEWS

Details

biocViews Software, Survival
Version 1.11.0
In Bioconductor since BioC 3.0 (R-3.1) (3 years)
License Artistic-2.0
Depends R (>= 3.1), methods, BiocGenerics, Biobase, SummarizedExperiment, survival, CoxBoost
Imports graphics, stats, gbm, Hmisc, S4Vectors, IRanges, GenomicRanges
LinkingTo
Suggests RUnit, BiocStyle, curatedOvarianData, parathyroidSE, superpc
SystemRequirements
Enhances
URL https://github.com/zhangyuqing/simulatorZ
BugReports https://github.com/zhangyuqing/simulatorZ
Depends On Me
Imports Me
Suggests Me doppelgangR
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package simulatorZ_1.11.0.tar.gz
Windows Binary simulatorZ_1.11.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) simulatorZ_1.11.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/simulatorZ
Package Short Url http://bioconductor.org/packages/simulatorZ/
Package Downloads Report Download Stats

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