To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("spkTools")

In most cases, you don't need to download the package archive at all.

spkTools

 

   

This is the development version of spkTools; for the stable release version, see spkTools.

Methods for Spike-in Arrays

Bioconductor version: Development (3.4)

The package contains functions that can be used to compare expression measures on different array platforms.

Author: Matthew N McCall <mccallm at gmail.com>, Rafael A Irizarry <rafa at jhu.edu>

Maintainer: Matthew N McCall <mccallm at gmail.com>

Citation (from within R, enter citation("spkTools")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("spkTools")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("spkTools")

 

PDF R Script spkTools: Spike-in Data Analysis and Visualization
PDF   Reference Manual

Details

biocViews Microarray, Software, Technology
Version 1.29.0
In Bioconductor since BioC 2.4 (R-2.9) (7 years)
License GPL (>= 2)
Depends R (>= 2.7.0), Biobase(>= 2.5.5)
Imports Biobase(>= 2.5.5), graphics, grDevices, gtools, methods, RColorBrewer, stats, utils
LinkingTo
Suggests xtable
SystemRequirements
Enhances
URL http://bioconductor.org
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source spkTools_1.29.0.tar.gz
Windows Binary spkTools_1.29.0.zip
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/spkTools
Package Short Url http://bioconductor.org/packages/spkTools/
Package Downloads Report Download Stats

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