CHANGES IN VERSION 1.2.0 ----------------------- NEW FEATURES o qMeth can report methylation states for individual molecules (reportLevel="alignment") o qCount/qProfile gain argument to ignore spliced reads in counting CHANGES IN VERSION 1.0.0 ----------------------- INITIAL RELEASE o ChIP-seq with support for single-end, paired-end and allele specific samples o RNA-seq with support for spliced alignment, single-end, paired-end and allele specific samples o Bis-seq with support for single-end, paired-end and allele specific samples