To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BaseSpaceR")

In most cases, you don't need to download the package archive at all.

BaseSpaceR

 

R SDK for BaseSpace RESTful API

Bioconductor version: Release (3.1)

A rich R interface to Illumina's BaseSpace cloud computing environment, enabling the fast development of data analysis and visualisation tools.

Author: Adrian Alexa

Maintainer: Jared O'Connell <joconnell at illumina.com>

Citation (from within R, enter citation("BaseSpaceR")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BaseSpaceR")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BaseSpaceR")

 

PDF R Script BaseSpaceR
PDF   Reference Manual
Text   NEWS

Details

biocViews ConnectTools, DataImport, DataRepresentation, Genetics, HighThroughputSequencing, Infrastructure, Sequencing, Software
Version 1.12.1
In Bioconductor since BioC 2.12 (R-3.0) (2.5 years)
License Apache License 2.0
Depends R (>= 2.15.0), RCurl, RJSONIO
Imports methods
LinkingTo
Suggests RUnit, IRanges, Rsamtools
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BaseSpaceR_1.12.1.tar.gz
Windows Binary BaseSpaceR_1.12.1.zip
Mac OS X 10.6 (Snow Leopard) BaseSpaceR_1.12.1.tgz
Mac OS X 10.9 (Mavericks) BaseSpaceR_1.12.1.tgz
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