To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BioSeqClass")

In most cases, you don't need to download the package archive at all.

BioSeqClass

Classification for Biological Sequences

Bioconductor version: Release (2.14)

Extracting Features from Biological Sequences and Building Classification Model

Author: Li Hong sysptm@gmail.com

Maintainer: Li Hong <sysptm at gmail.com>

Citation (from within R, enter citation("BioSeqClass")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BioSeqClass")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BioSeqClass")

 

PDF R Script Using the BioSeqClass Package
PDF   Reference Manual

Details

biocViews Classification, Software
Version 1.22.0
In Bioconductor since BioC 2.5 (R-2.10)
License LGPL (>= 2.0)
Depends R (>= 2.10), scatterplot3d
Imports Biostrings, ipred, e1071, klaR, randomForest, class, tree, nnet, rpart, party, foreign, Biobase, utils, stats, grDevices
Suggests scatterplot3d
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BioSeqClass_1.22.0.tar.gz
Windows Binary BioSeqClass_1.22.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BioSeqClass_1.22.0.tgz
Mac OS X 10.9 (Mavericks) BioSeqClass_1.22.0.tgz
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