To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("CGHbase")

In most cases, you don't need to download the package archive at all.

CGHbase

CGHbase: Base functions and classes for arrayCGH data analysis.

Bioconductor version: Release (3.0)

Contains functions and classes that are needed by arrayCGH packages.

Author: Sjoerd Vosse, Mark van de Wiel

Maintainer: Mark van de Wiel <mark.vdwiel at vumc.nl>

Citation (from within R, enter citation("CGHbase")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("CGHbase")

Documentation

PDF   Reference Manual

Details

biocViews CopyNumberVariation, Infrastructure, Microarray, Software
Version 1.26.0
In Bioconductor since BioC 2.3 (R-2.8)
License GPL
Depends R (>= 2.10), methods, Biobase(>= 2.5.5), marray
Imports
Suggests
SystemRequirements
URL
Depends On Me CGHcall, CGHnormaliter, CGHregions, sigaR
Imports Me CGHnormaliter, plrs, QDNAseq
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source CGHbase_1.26.0.tar.gz
Windows Binary CGHbase_1.26.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) CGHbase_1.26.0.tgz
Mac OS X 10.9 (Mavericks) CGHbase_1.26.0.tgz
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