GeneAnswers

Integrated Interpretation of Genes

Bioconductor version: Release (2.9)

GeneAnswers provides an integrated tool for biological or medical interpretation of the given one or more groups of genes by means of statistical test.

Author: Gang Feng, Pan Du, Tian Xia, Warren Kibbe and Simon Lin

Maintainer: Gang Feng, Pan Du and Tian Xia

To install this package, start R and enter:

    source("http:///biocLite.R")
    biocLite("GeneAnswers")

To cite this package in a publication, start R and enter:

    citation("GeneAnswers")

Documentation

PDF	R Script	Summarize gene annotations based on collective ontology annotations
PDF	R Script	GeneAnswers
PDF	R Script	GeneAnswers web-based visualization module
PDF		Reference Manual
Text		NEWS

Details

biocViews	Infrastructure, DataRepresentation, Visualization, GraphsAndNetworks
Depends	R, igraph, RCurl, annotate, Biobase, methods, XML, RSQLite, MASS, rgl, Heatplus, RColorBrewer
Imports	graph, Rgraphviz, RBGL, annotate
Suggests	GO.db, KEGG.db, biomaRt, AnnotationDbi, org.Hs.eg.db, org.Rn.eg.db, org.Mm.eg.db, org.Dm.eg.db
System Requirements
License	LGPL (>= 2)
URL
Depends On Me
Imports Me
Suggests Me	lumi
Version	1.10.0
Since	Bioconductor 2.5 (R-2.10)

Package Downloads

Package Source	GeneAnswers_1.10.0.tar.gz
Windows Binary	GeneAnswers_1.10.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	GeneAnswers_1.10.0.tgz
Package Downloads Report	Download Stats

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