To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("HDF5Array")

In most cases, you don't need to download the package archive at all.

HDF5Array

DOI: 10.18129/B9.bioc.HDF5Array    

HDF5 back end for DelayedArray objects

Bioconductor version: Release (3.6)

An array-like container for convenient access and manipulation of HDF5 datasets. Supports delayed operations and block processing.

Author: Hervé Pagès

Maintainer: Hervé Pagès <hpages at fredhutch.org>

Citation (from within R, enter citation("HDF5Array")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("HDF5Array")

Documentation

PDF   Reference Manual

Details

biocViews Annotation, Coverage, DataRepresentation, GenomeAnnotation, Infrastructure, Sequencing, Software
Version 1.6.0
In Bioconductor since BioC 3.3 (R-3.3) (1.5 years)
License Artistic-2.0
Depends R (>= 3.4), methods, DelayedArray(>= 0.3.18), rhdf5
Imports utils, tools, BiocGenerics, S4Vectors, IRanges
LinkingTo
Suggests h5vcData, SummarizedExperiment(>= 1.5.6), GenomicRanges, BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me beachmat, bsseq
Suggests Me DelayedArray, DelayedMatrixStats, MultiAssayExperiment, scran, SummarizedExperiment
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HDF5Array_1.6.0.tar.gz
Windows Binary HDF5Array_1.6.0.zip
Mac OS X 10.11 (El Capitan) HDF5Array_1.6.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/HDF5Array
Package Short Url http://bioconductor.org/packages/HDF5Array/
Package Downloads Report Download Stats

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