IsoCorrectoRGUI

DOI: 10.18129/B9.bioc.IsoCorrectoRGUI    

Graphical User Interface for IsoCorrectoR

Bioconductor version: Release (3.10)

IsoCorrectoRGUI is a Graphical User Interface for the IsoCorrectoR package. IsoCorrectoR performs the correction of mass spectrometry data from stable isotope labeling/tracing metabolomics experiments with regard to natural isotope abundance and tracer impurity. Data from both MS and MS/MS measurements can be corrected (with any tracer isotope: 13C, 15N, 18O...), as well as high resolution MS data from multiple-tracer experiments (e.g. 13C and 15N used simultaneously).

Author: Christian Kohler [cre, aut], Paul Kuerner [aut], Paul Heinrich [aut]

Maintainer: Christian Kohler <christian.kohler at ur.de>

Citation (from within R, enter citation("IsoCorrectoRGUI")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("IsoCorrectoRGUI")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("IsoCorrectoRGUI")

 

HTML R Script IsoCorrectoR
PDF   Reference Manual
Text   NEWS

Details

biocViews GUI, ImmunoOncology, MassSpectrometry, Metabolomics, Preprocessing, Software
Version 1.2.0
In Bioconductor since BioC 3.9 (R-3.6) (0.5 years)
License GPL-3
Depends R (>= 3.6)
Imports IsoCorrectoR, readxl, tcltk2, tcltk, utils
LinkingTo
Suggests knitr, rmarkdown, testthat
SystemRequirements
Enhances
URL https://genomics.ur.de/files/IsoCorrectoRGUI
Depends On Me
Imports Me
Suggests Me IsoCorrectoR
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package IsoCorrectoRGUI_1.2.0.tar.gz
Windows Binary IsoCorrectoRGUI_1.2.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) IsoCorrectoRGUI_1.2.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/IsoCorrectoRGUI
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/IsoCorrectoRGUI
Package Short Url https://bioconductor.org/packages/IsoCorrectoRGUI/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: