To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("LMGene")

In most cases, you don't need to download the package archive at all.

LMGene

 

LMGene Software for Data Transformation and Identification of Differentially Expressed Genes in Gene Expression Arrays

Bioconductor version: Release (3.1)

LMGene package for analysis of microarray data using a linear model and glog data transformation

Author: David Rocke, Geun Cheol Lee, John Tillinghast, Blythe Durbin-Johnson, and Shiquan Wu

Maintainer: Blythe Durbin-Johnson <bpdurbin at ucdavis.edu>

Citation (from within R, enter citation("LMGene")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("LMGene")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("LMGene")

 

PDF R Script LMGene User's Guide
PDF   Reference Manual

Details

biocViews DifferentialExpression, Microarray, Preprocessing, Software
Version 2.24.0
In Bioconductor since BioC 1.8 (R-2.3) (9.5 years)
License LGPL
Depends R (>= 2.10.0), Biobase(>= 2.5.5), multtest, survival, affy
Imports
LinkingTo
Suggests affydata
SystemRequirements
Enhances
URL http://dmrocke.ucdavis.edu/software.html
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source LMGene_2.24.0.tar.gz
Windows Binary LMGene_2.24.0.zip
Mac OS X 10.6 (Snow Leopard) LMGene_2.24.0.tgz
Mac OS X 10.9 (Mavericks) LMGene_2.24.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/LMGene/tree/release-3.1
Package Short Url http://bioconductor.org/packages/LMGene/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

Fred Hutchinson Cancer Research Center