To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("PREDA")

In most cases, you don't need to download the package archive at all.

PREDA

Position RElated Data Anlysis

Bioconductor version: Release (3.0)

Package for the position related analysis of quantitative functional genomics data.

Author: Francesco Ferrari <francesco.ferrari at unimore.it>

Maintainer: Francesco Ferrari <francesco.ferrari at unimore.it>

Citation (from within R, enter citation("PREDA")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("PREDA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PREDA")

 

PDF R Script PREDA S4-classes
PDF R Script PREDA tutorial
PDF   Reference Manual

Details

biocViews CopyNumberVariation, GeneExpression, Genetics, Software
Version 1.12.0
In Bioconductor since BioC 2.9 (R-2.14)
License GPL-2
Depends R (>= 2.9.0), Biobase, lokern (>= 1.0.9), multtest, stats, methods, annotate
Imports
Suggests quantsmooth, qvalue, samr, limma, caTools, affy, PREDAsampledata
System Requirements
URL
Depends On Me PREDAsampledata
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source PREDA_1.12.0.tar.gz
Windows Binary PREDA_1.12.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) PREDA_1.12.0.tgz
Mac OS X 10.9 (Mavericks) PREDA_1.12.0.tgz
Browse/checkout source (username/password: readonly)
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