ProCoNA

DOI: 10.18129/B9.bioc.ProCoNA    

Protein co-expression network analysis (ProCoNA).

Bioconductor version: Release (3.7)

Protein co-expression network construction using peptide level data, with statisical analysis. (Journal of Clinical Bioinformatics 2013, 3:11 doi:10.1186/2043-9113-3-11)

Author: David L Gibbs

Maintainer: David L Gibbs <gibbsd at ohsu.edu>

Citation (from within R, enter citation("ProCoNA")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ProCoNA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ProCoNA")

 

PDF R Script De Novo Peptide Network Example
PDF   Reference Manual
Text   README
Text   NEWS

Details

biocViews GraphAndNetwork, Proteomics, Software
Version 1.18.0
In Bioconductor since BioC 2.13 (R-3.0) (5 years)
License GPL (>= 2)
Depends R (>= 2.10), methods, WGCNA, MSnbase, flashClust
Imports BiocGenerics, GOstats
LinkingTo
Suggests RUnit
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ProCoNA_1.18.0.tar.gz
Windows Binary ProCoNA_1.18.0.zip
Mac OS X 10.11 (El Capitan) ProCoNA_1.18.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ProCoNA
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ProCoNA
Package Short Url http://bioconductor.org/packages/ProCoNA/
Package Downloads Report Download Stats

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