To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ROTS")

In most cases, you don't need to download the package archive at all.

ROTS

DOI: 10.18129/B9.bioc.ROTS    

Reproducibility-Optimized Test Statistic

Bioconductor version: Release (3.5)

Calculates the Reproducibility-Optimized Test Statistic (ROTS) for differential testing in omics data.

Author: Fatemeh Seyednasrollah, Tomi Suomi, Laura L. Elo

Maintainer: Fatemeh Seyednasrollah <fatsey at utu.fi>

Citation (from within R, enter citation("ROTS")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ROTS")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ROTS")

 

PDF R Script ROTS: Reproducibility Optimized Test Statistic
PDF   Reference Manual
Text   NEWS

Details

biocViews DifferentialExpression, GeneExpression, Microarray, Proteomics, RNASeq, Software
Version 1.4.0
In Bioconductor since BioC 3.3 (R-3.3) (1.5 years)
License GPL (>= 2)
Depends R (>= 3.3)
Imports Rcpp, stats, Biobase, methods
LinkingTo Rcpp
Suggests testthat
SystemRequirements
Enhances
URL
Depends On Me
Imports Me PECA
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source ROTS_1.4.0.tar.gz
Windows Binary ROTS_1.4.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) ROTS_1.4.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ROTS
Package Short Url http://bioconductor.org/packages/ROTS/
Package Downloads Report Download Stats

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