To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Rgraphviz")

In most cases, you don't need to download the package archive at all.

Rgraphviz

 

Provides plotting capabilities for R graph objects

Bioconductor version: Release (3.1)

Interfaces R with the AT and T graphviz library for plotting R graph objects from the graph package.

Author: Kasper Daniel Hansen [cre, aut], Jeff Gentry [aut], Li Long [aut], Robert Gentleman [aut], Seth Falcon [aut], Florian Hahne [aut], Deepayan Sarkar [aut]

Maintainer: Kasper Daniel Hansen <kasperdanielhansen at gmail.com>

Citation (from within R, enter citation("Rgraphviz")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Rgraphviz")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rgraphviz")

 

PDF R Script A New Interface to Plot Graphs Using Rgraphviz
PDF R Script How To Plot A Graph Using Rgraphviz
PDF   Reference Manual
Text   NEWS

Details

biocViews GraphAndNetwork, Software, Visualization
Version 2.12.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 10 years)
License EPL
Depends R (>= 2.6.0), methods, utils, graph, grid
Imports stats4, graphics, grDevices
LinkingTo
Suggests RUnit, BiocGenerics, XML
SystemRequirements optionally Graphviz (>= 2.16)
Enhances
URL
Depends On Me biocGraph, BioMVCClass, CellNOptR, flowCL, flowMerge, gaucho, GOFunction, MineICA, mvGST, netresponse, paircompviz, pathRender, ROntoTools, SplicingGraphs, TDARACNE, ToPASeq, TRONCO
Imports Me apComplex, biocGraph, CompGO, DEGraph, EnrichmentBrowser, facopy, flowWorkspace, GOFunction, hyperdraw, nem, OncoSimulR, paircompviz, pathview, qpgraph, RchyOptimyx, SplicingGraphs
Suggests Me altcdfenvs, annotate, BiocCaseStudies, Category, CNORfeeder, CNORfuzzy, ddgraph, DEGraph, flowCore, GeneNetworkBuilder, geneplotter, GlobalAncova, globaltest, GOstats, GSEABase, KEGGgraph, MLP, NCIgraph, NCIgraphData, oneChannelGUI, pcaGoPromoter, pkgDepTools, RBGL, RBioinf, rBiopaxParser, RDAVIDWebService, RpsiXML, Rtreemix, safe, SNAData, SPIA, SRAdb, Streamer, topGO, vtpnet
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source Rgraphviz_2.12.0.tar.gz
Windows Binary Rgraphviz_2.12.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) Rgraphviz_2.12.0.tgz
Mac OS X 10.9 (Mavericks) Rgraphviz_2.12.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/Rgraphviz/tree/release-3.1
Package Short Url http://bioconductor.org/packages/Rgraphviz/
Package Downloads Report Download Stats

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