To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("SMAP")

In most cases, you don't need to download the package archive at all.

SMAP

A Segmental Maximum A Posteriori Approach to Array-CGH Copy Number Profiling

Bioconductor version: Release (2.14)

Functions and classes for DNA copy number profiling of array-CGH data

Author: Robin Andersson <robin.andersson at lcb.uu.se>

Maintainer: Robin Andersson <robin.andersson at lcb.uu.se>

Citation (from within R, enter citation("SMAP")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("SMAP")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SMAP")

 

PDF R Script SMAP
PDF   Reference Manual

Details

biocViews CopyNumberVariation, Microarray, Software, TwoChannel
Version 1.28.0
In Bioconductor since BioC 2.1 (R-2.6)
License GPL-2
Depends R (>= 2.10), methods
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source SMAP_1.28.0.tar.gz
Windows Binary SMAP_1.28.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) SMAP_1.28.0.tgz
Mac OS X 10.9 (Mavericks) SMAP_1.28.0.tgz
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center