SpeCond

Condition specific detection from expression data

This package performs a gene expression data analysis to detect condition-specific genes. Such genes are significantly up- or down-regulated in a small number of conditions. It does so by fitting a mixture of normal distributions to the expression values. Conditions can be environmental conditions, different tissues, organs or any other sources that you wish to compare in terms of gene expression.

Author Florence Cavalli
Maintainer Florence Cavalli

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("SpeCond")

Documentation

SpeCond PDF R Script
Reference Manual

Details

biocViews
Depends
R , mclust , Biobase , fields , hwriter , RColorBrewer , methods
Imports
Suggests
System Requirements
License LGPL (>=2)
URL
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Package Downloads

Package source SpeCond_1.2.0.tar.gz
Windows 32-bit binary SpeCond_1.2.0.zip
Windows 64-bit binary SpeCond_1.2.0.zip
MacOS X 10.5 (Leopard) binary SpeCond_1.2.0.tgz
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