This package implements clustering of microarray gene expression profiles according to functional annotations. For each term genes are annotated to, splits into two subclasses are computed and a significance of the supporting gene set is determined.
| Author | Claudio Lottaz, Joern Toedling |
| Maintainer | Claudio Lottaz |
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("adSplit")
| Annotation-Driven Clustering | R Script | |
|---|---|---|
| Rplots.pdf | ||
| bcb_logo.pdf | ||
| minerva_bcb.pdf | ||
| Reference Manual |
| biocViews | |
|---|---|
| Depends |
R
,
methods
|
| Imports |
AnnotationDbi
,
Biobase
,
cluster
,
GO.db
,
graphics
,
grDevices
,
KEGG.db
,
methods
,
multtest
,
stats
|
| Suggests | |
| System Requirements | |
| License | GPL (>= 2) |
| URL | http://compdiag.molgen.mpg.de/software/index.shtml |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
| Package source | adSplit_1.18.0.tar.gz |
|---|---|
| Windows 32-bit binary | adSplit_1.18.0.zip |
| Windows 64-bit binary | adSplit_1.18.0.zip |
| MacOS X 10.5 (Leopard) binary | adSplit_1.18.0.tgz |
| Package Downloads Report | Downloads Stats |