affyContam

DOI: 10.18129/B9.bioc.affyContam    

structured corruption of affymetrix cel file data

Bioconductor version: Release (3.8)

structured corruption of cel file data to demonstrate QA effectiveness

Author: V. Carey

Maintainer: V. Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("affyContam")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("affyContam", version = "3.8")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("affyContam")

 

PDF R Script affy contamination tools
PDF   Reference Manual

Details

biocViews Infrastructure, Software
Version 1.40.0
In Bioconductor since BioC 2.3 (R-2.8) (10 years)
License Artistic-2.0
Depends R (>= 2.7.0), tools, methods, utils, Biobase, affy, affydata
Imports
LinkingTo
Suggests hgu95av2cdf
SystemRequirements
Enhances
URL
Depends On Me
Imports Me arrayMvout
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package affyContam_1.40.0.tar.gz
Windows Binary affyContam_1.40.0.zip
Mac OS X 10.11 (El Capitan) affyContam_1.40.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/affyContam
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/affyContam
Package Short Url http://bioconductor.org/packages/affyContam/
Package Downloads Report Download Stats

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