affyPara

Parallelized preprocessing methods for Affymetrix Oligonucleotide Arrays

The package contains parallelized functions for exploratory oligonucleotide array analysis. The package is designed for large numbers of microarray data.

Author	Markus Schmidberger , Esmeralda Vicedo , Ulrich Mansmann
Maintainer	Markus Schmidberger

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("affyPara")

Documentation

Parallelized affy functions for preprocessing	PDF	R Script
Simulation Study for VSN Add-On Normalization and Subsample Size	PDF	R Script
Reference Manual

Details

biocViews	Microarray , Preprocessing
Depends	R , methods , affy , snow , vsn , aplpack
Imports
Suggests	affydata
System Requirements
License	GPL-3
URL	http://www.ibe.med.uni-muenchen.de
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Package Downloads

Package source	affyPara_1.6.0.tar.gz
Windows binary	affyPara_1.6.0.zip
MacOS X 10.4 (Tiger) binary	affyPara_1.6.0.tgz
MacOS X 10.5 (Leopard) binary	affyPara_1.6.0.tgz
Package Downloads Report	Downloads Stats