cellHTS2

Analysis of cell-based screens - revised version of cellHTS

Analysis of cell-based RNA interference screens. See ?cellHTS2 for a brief introduction.

Author	Ligia Bras , Wolfgang Huber , Michael Boutros , Gregoire Pau , Florian Hahne
Maintainer	Florian Hahne

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("cellHTS2")

Main vignette (complete version): End-to-end analysis of cell-based screens	PDF	R Script
Main vignette: End-to-end analysis of cell-based screens	PDF	R Script
Supplement: enhancer-suppressor screens	PDF	R Script
Supplement: multi-channel assays	PDF	R Script
Reference Manual

biocViews	CellBasedAssays , Preprocessing , Visualization
Depends	RColorBrewer , Biobase , methods , genefilter , splots , vsn , hwriter , locfit , grid
Imports	prada , GSEABase , Category
Suggests
System Requirements
License	Artistic-2.0
URL	http://www.dkfz.de/signaling, http://www.ebi.ac.uk/huber
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