flowStats

DOI: 10.18129/B9.bioc.flowStats    

Statistical methods for the analysis of flow cytometry data

Bioconductor version: Release (3.8)

Methods and functionality to analyse flow data that is beyond the basic infrastructure provided by the flowCore package.

Author: Florian Hahne, Nishant Gopalakrishnan, Alireza Hadj Khodabakhshi, Chao-Jen Wong, Kyongryun Lee

Maintainer: Greg Finak <gfinak at fhcrc.org> and Mike Jiang <wjiang2 at fhcrc.org>

Citation (from within R, enter citation("flowStats")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("flowStats", version = "3.8")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowStats")

 

PDF R Script flowStats Overview
PDF   Reference Manual
Text   NEWS

Details

biocViews CellBasedAssays, FlowCytometry, Software
Version 3.40.0
In Bioconductor since BioC 2.4 (R-2.9) (9.5 years)
License Artistic-2.0
Depends R (>= 2.10), flowCore, cluster, flowWorkspace, ncdfFlow(>= 2.19.5)
Imports BiocGenerics, MASS, flowViz, fda (>= 2.2.6), Biobase, methods, grDevices, graphics, stats, utils, KernSmooth, lattice, ks, RColorBrewer
LinkingTo
Suggests xtable
SystemRequirements
Enhances RBGL, graph
URL http://www.github.com/RGLab/flowStats
BugReports http://www.github.com/RGLab/flowStats/issues
Depends On Me flowVS, highthroughputassays
Imports Me openCyto, plateCore
Suggests Me cydar, flowCore, flowViz, ggcyto
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowStats_3.40.0.tar.gz
Windows Binary flowStats_3.40.0.zip
Mac OS X 10.11 (El Capitan) flowStats_3.40.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowStats
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowStats
Package Short Url http://bioconductor.org/packages/flowStats/
Package Downloads Report Download Stats

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