DOI: 10.18129/B9.bioc.gaucho    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.8 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see gaucho.

Genetic Algorithms for Understanding Clonal Heterogeneity and Ordering

Bioconductor version: Release (3.8)

Use genetic algorithms to determine the relationship between clones in heterogenous populations such as cancer sequencing samples

Author: Alex Murison [aut, cre], Christopher Wardell [aut, cre]

Maintainer: Alex Murison <Alexander.Murison at>, Christopher Wardell <Christopher.Wardell at>

Citation (from within R, enter citation("gaucho")):


To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("gaucho", version = "3.8")

For older versions of R, please refer to the appropriate Bioconductor release.


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biocViews Genetics, SNP, Sequencing, Software, SomaticMutation
Version 1.18.0
In Bioconductor since BioC 2.14 (R-3.1) (5 years)
License GPL-3
Depends R (>= 3.0.0), compiler, GA, graph,, png, Rgraphviz
Suggests knitr
Depends On Me
Imports Me
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