To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("iCheck")

In most cases, you don't need to download the package archive at all.

iCheck

DOI: 10.18129/B9.bioc.iCheck    

QC Pipeline and Data Analysis Tools for High-Dimensional Illumina mRNA Expression Data

Bioconductor version: Release (3.5)

QC pipeline and data analysis tools for high-dimensional Illumina mRNA expression data.

Author: Weiliang Qiu [aut, cre], Brandon Guo [aut, ctb], Christopher Anderson [aut, ctb], Barbara Klanderman [aut, ctb], Vincent Carey [aut, ctb], Benjamin Raby [aut, ctb]

Maintainer: Weiliang Qiu <stwxq at channing.harvard.edu>

Citation (from within R, enter citation("iCheck")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("iCheck")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("iCheck")

 

PDF R Script iCheck
PDF   Reference Manual
Text   NEWS

Details

biocViews DNAMethylation, DifferentialExpression, GeneExpression, Microarray, OneChannel, Preprocessing, QualityControl, Software, TwoChannel
Version 1.6.0
In Bioconductor since BioC 3.2 (R-3.2) (2 years)
License GPL (>= 2)
Depends R (>= 3.2.0), Biobase, lumi, gplots
Imports stats, graphics, preprocessCore, grDevices, randomForest, affy, limma, parallel, GeneSelectMMD, rgl, MASS, lmtest, scatterplot3d, utils
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source iCheck_1.6.0.tar.gz
Windows Binary iCheck_1.6.0.zip
Mac OS X 10.11 (El Capitan) iCheck_1.6.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/iCheck
Package Short Url http://bioconductor.org/packages/iCheck/
Package Downloads Report Download Stats

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