To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("interactiveDisplay")

In most cases, you don't need to download the package archive at all.

interactiveDisplay

Package for enabling powerful shiny web displays of Bioconductor objects

Bioconductor version: Release (3.0)

The interactiveDisplay package contains the methods needed to generate interactive Shiny based display methods for Bioconductor objects.

Author: Shawn Balcome, Marc Carlson

Maintainer: Shawn Balcome <balc0022 at umn.edu>

Citation (from within R, enter citation("interactiveDisplay")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("interactiveDisplay")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("interactiveDisplay")

 

PDF R Script interactiveDisplay: A package for enabling interactive visualization of Bioconductor objects
HTML R Script Using interactiveDisplay for Bioconductor object visualization and modification
PDF   Reference Manual

Details

biocViews AnnotationData, Classification, DataRepresentation, GO, GUI, GeneExpression, Genetics, Microarray, Network, QualityControl, Sequencing, Software, Visualization
Version 1.4.0
In Bioconductor since BioC 2.13 (R-3.0)
License Artistic-2.0
Depends R (>= 2.10), methods, BiocGenerics, grid
Imports interactiveDisplayBase, shiny, RColorBrewer, ggplot2, reshape2, plyr, gridSVG, XML, Category, AnnotationDbi
Suggests RUnit, hgu95av2.db, knitr, GenomicRanges, GOstats, ggbio, GO.db, Gviz, rtracklayer, metagenomeSeq, gplots, vegan, Biobase
System Requirements
URL
Depends On Me metagenomeSeq
Imports Me AnnotationHub, RforProteomics
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source interactiveDisplay_1.4.0.tar.gz
Windows Binary interactiveDisplay_1.4.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) interactiveDisplay_1.4.0.tgz
Mac OS X 10.9 (Mavericks) interactiveDisplay_1.4.0.tgz
Browse/checkout source (username/password: readonly)
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