DOI: 10.18129/B9.bioc.logitT    

logit-t Package

Bioconductor version: Release (3.8)

The logitT library implements the Logit-t algorithm introduced in --A high performance test of differential gene expression for oligonucleotide arrays-- by William J Lemon, Sandya Liyanarachchi and Ming You for use with Affymetrix data stored in an AffyBatch object in R.

Author: Tobias Guennel <tguennel at vcu.edu>

Maintainer: Tobias Guennel <tguennel at vcu.edu>

Citation (from within R, enter citation("logitT")):


To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("logitT", version = "3.8")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script logitT primer
PDF   Reference Manual


biocViews DifferentialExpression, Microarray, Software
Version 1.40.0
In Bioconductor since BioC 2.3 (R-2.8) (10.5 years)
License GPL (>= 2)
Depends affy
Suggests SpikeInSubset
URL http://www.bioconductor.org
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package logitT_1.40.0.tar.gz
Windows Binary logitT_1.40.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) logitT_1.40.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/logitT
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/logitT
Package Short Url http://bioconductor.org/packages/logitT/
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