To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mdgsa")

In most cases, you don't need to download the package archive at all.

mdgsa

DOI: 10.18129/B9.bioc.mdgsa    

Multi Dimensional Gene Set Analysis.

Bioconductor version: Release (3.6)

Functions to preform a Gene Set Analysis in several genomic dimensions. Including methods for miRNAs.

Author: David Montaner <dmontaner at cipf.es>

Maintainer: David Montaner <dmontaner at cipf.es>

Citation (from within R, enter citation("mdgsa")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mdgsa")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mdgsa")

 

PDF R Script mdgsa_vignette
PDF   Reference Manual

Details

biocViews Annotation, GO, GeneSetEnrichment, Pathways, Software
Version 1.10.0
In Bioconductor since BioC 3.1 (R-3.2) (2.5 years)
License GPL
Depends R (>= 2.14)
Imports AnnotationDbi, DBI, GO.db, KEGG.db, cluster, Matrix
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, limma, ALL, hgu95av2.db, RUnit, BiocGenerics
SystemRequirements
Enhances
URL https://github.com/dmontaner/mdgsa http://www.dmontaner.com
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package mdgsa_1.10.0.tar.gz
Windows Binary mdgsa_1.10.0.zip
Mac OS X 10.11 (El Capitan) mdgsa_1.10.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/mdgsa
Package Short Url http://bioconductor.org/packages/mdgsa/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: