snpMatrix

The snp.matrix and X.snp.matrix classes

Implements classes and methods for large-scale SNP association studies

Author	David Clayton and Hin-Tak Leung
Maintainer	David Clayton

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("snpMatrix")

Imputation and meta-analysis	PDF	R Script
Principal components analysis	PDF	R Script
TDT tests	PDF	R Script
clustering-comparison-vignette.pdf	PDF
snpMatrix introduction	PDF	R Script
snpMatrix-paper-HumanHeridity2007.pdf	PDF
Reference Manual

biocViews	Microarray , SNP , GeneticVariability
Depends	R , survival , methods
Imports	graphics , grDevices , methods , stats , survival , utils
Suggests	hexbin
System Requirements
License	GPL-3
URL	http://www-gene.cimr.cam.ac.uk/clayton/software/
Depends On Me	GGBase , GGtools
Imports Me
Suggests Me	crlmm