yaqcaffy

Affymetrix expression data quality control and reproducibility analysis

Quality control of Affymetrix GeneChip expression data and reproducibility analysis of human whole genome chips with the MAQC reference datasets.

Author	Laurent Gatto
Maintainer	Laurent Gatto

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("yaqcaffy")

yaqcaffy: Affymetrix quality control and MAQC reproducibility	PDF	R Script
Reference Manual

biocViews	Microarray , OneChannel , QualityControl , ReportWriting
Depends	simpleaffy , methods
Imports	simpleaffy , methods
Suggests	MAQCsubsetAFX , affydata , xtable , tcltk2 , tcltk
System Requirements
License	Artistic-2.0
URL	http://sites.google.com/site/laurentgatto/r-bioconductor/yaqcaffy
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