## ----style, echo = FALSE, results = 'asis', message=FALSE--------------------- BiocStyle::markdown() ## ----install, eval=FALSE------------------------------------------------------ # if(!requireNamespace("BiocManager", quietly = TRUE)) # install.packages("BiocManager") # BiocManager::install("AHPubMedDbs") ## ----load-lib, message = FALSE------------------------------------------------ library(AnnotationHub) ah <- AnnotationHub() ## ----list-PubMedDb------------------------------------------------------------ query(ah, "PubMed") ## ----confirm-metadata--------------------------------------------------------- mcols(query(ah, "PubMed")) ## ----query-mouse-------------------------------------------------------------- qr <- query(ah, c("PubMedDb")) # pubmed_tibble <- qr[[1]] ## ----sessionInfo, echo=FALSE-------------------------------------------------- sessionInfo()