To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("GGdata")

In most cases, you don't need to download the package archive at all.

GGdata

all 90 hapmap CEU samples, 47K expression, 4mm SNP

Bioconductor version: Release (3.0)

data exemplars dealing with hapmap SNP reports, GWAS, etc.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("GGdata")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("GGdata")

Documentation

PDF   Reference Manual

Details

biocViews ExperimentData, HapMap
Version 1.3.1
License LGPL
Depends R (>= 2.12.0), methods, Biobase(>= 2.5.5), GGBase, snpStats, illuminaHumanv1.db, AnnotationDbi
Imports
Suggests
System Requirements
URL
Depends On Me ggtut
Imports Me
Suggests Me crlmm, encoDnaseI, GGtools

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source GGdata_1.3.1.tar.gz
Windows Binary GGdata_1.3.1.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) GGdata_1.3.1.tgz
Mac OS X 10.9 (Mavericks) GGdata_1.3.1.tgz
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center