To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RNAinteractMAPK")

In most cases, you don't need to download the package archive at all.

RNAinteractMAPK

 

Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi

Bioconductor version: Release (3.1)

This package includes all data used in the paper -Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi- by Horn, Sandmann, Fischer et al.., Nat. Methods, 2011. The package vignette shows the R code to reproduce all figures in the paper.

Author: Bernd Fischer <b.fischer at dkfz.de>

Maintainer: Bernd Fischer <b.fischer at dkfz.de>

Citation (from within R, enter citation("RNAinteractMAPK")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RNAinteractMAPK")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RNAinteractMAPK")

 

PDF R Script RNAinteractMAPK
PDF   Reference Manual

Details

biocViews CellCulture, Drosophila_melanogaster_Data, ExperimentData, MicrotitrePlateAssayData
Version 1.6.0
License Artistic-2.0
Depends R (>= 2.12.0), methods, fields, sparseLDA, RNAinteract
Imports grid, gdata, MASS, genefilter
LinkingTo
Suggests qvalue, lattice
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me DmelSGI
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source RNAinteractMAPK_1.6.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/RNAinteractMAPK/
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