To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RNAinteractMAPK")

In most cases, you don't need to download the package archive at all.

RNAinteractMAPK

Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi

Bioconductor version: Release (3.0)

This package includes all data used in the paper -Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi- by Horn, Sandmann, Fischer et al.., Nat. Methods, 2011. The package vignette shows the R code to reproduce all figures in the paper.

Author: Bernd Fischer <bernd.fischer at embl.de>

Maintainer: Bernd Fischer <bernd.fischer at embl.de>

Citation (from within R, enter citation("RNAinteractMAPK")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RNAinteractMAPK")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RNAinteractMAPK")

 

PDF R Script RNAinteractMAPK
PDF   Reference Manual

Details

biocViews ExperimentData
Version 1.3.1
License Artistic-2.0
Depends R (>= 2.12.0), methods, fields, sparseLDA, RNAinteract
Imports grid, gdata, MASS, genefilter
Suggests qvalue, lattice
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source RNAinteractMAPK_1.3.1.tar.gz
Windows Binary RNAinteractMAPK_1.3.1.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) RNAinteractMAPK_1.3.0.tgz
Mac OS X 10.9 (Mavericks) RNAinteractMAPK_1.3.0.tgz
Browse/checkout source (username/password: readonly)
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