To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("dsQTL")

In most cases, you don't need to download the package archive at all.

dsQTL

 

dsQTL, data excerpt from Degner et al. 2012 Nature letter

Bioconductor version: Release (3.2)

dsQTL, excerpt from Degner et al. 2012 Nature letter on DNA variants associated with DnaseI hypersensitivity

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("dsQTL")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("dsQTL")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("dsQTL")

 

PDF R Script dsQTL, data excerpt from Degner et al. 2012 Nature letter
PDF   Reference Manual
Text   NEWS

Details

biocViews BiocViews, DNASeqData, ExperimentData, Genome, NCI, Project1000genomes, SequencingData
Version 0.8.0
License Artistic-2.0
Depends R (>= 2.15.0), utils, Biobase, SummarizedExperiment, GGBase(>= 3.31.1)
Imports
LinkingTo
Suggests GGtools, rtracklayer
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source dsQTL_0.8.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/dsQTL/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

Fred Hutchinson Cancer Research Center