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dyebiasexamples

 

Example data for the dyebias package, which implements the GASSCO method.

Bioconductor version: Release (3.1)

Data for the dyebias package, consisting of 4 self-self hybrizations of self-spotted yeast slides, as well as data from Array Express accession E-MTAB-32

Author: Philip Lijnzaad <p.lijnzaad at umcutrecht.nl> and Thanasis Margaritis <a.margaritis at umcutrecht.nl>

Maintainer: Philip Lijnzaad <p.lijnzaad at umcutrecht.nl>

Citation (from within R, enter citation("dyebiasexamples")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("dyebiasexamples")

Documentation

PDF   Reference Manual
Text   LICENSE

Details

biocViews ArrayExpress, CGHData, ExperimentData, MicroarrayData, SAGEData, TwoChannelData
Version 1.6.0
License GPL-3
Depends R (>= 1.4.1), marray, GEOquery
Imports
LinkingTo
Suggests dyebias, convert, Biobase
SystemRequirements
Enhances
URL http://www.holstegelab.nl/publications/margaritis_lijnzaad
Depends On Me
Imports Me
Suggests Me dyebias
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source dyebiasexamples_1.6.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/dyebiasexamples/
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