seqCNA.annot

Annotation for the copy number analysis of deep sequencing cancer data with seqCNA

Bioconductor version: Release (2.14)

Provides annotation on GC content, mappability and genomic features for various genomes

Author: David Mosen-Ansorena

Maintainer: David Mosen-Ansorena <dmosen.gn at cicbiogune.es>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("seqCNA.annot")

To cite this package in a publication, start R and enter:

    citation("seqCNA.annot")

Documentation

PDF   Reference Manual

Details

biocViews Bioinformatics, CopyNumberVariants, ExperimentData, Genetics, HighThroughputSequencing
Version 1.0.0
License GPL-3
Depends R (>= 2.10)
Imports
Suggests
System Requirements
URL
Depends On Me seqCNA
Imports Me
Suggests Me

Package Downloads

Package Source seqCNA.annot_1.0.0.tar.gz
Windows Binary seqCNA.annot_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) seqCNA.annot_1.0.0.tgz
Mac OS X 10.9 (Mavericks) seqCNA.annot_1.0.0.tgz
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