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Lab1.R

################################################### ### chunk number 1: loadlibs ###################################################

library(Biobase) library(annotate) library(golubEsets)

################################################### ### chunk number 2: lookatesets ###################################################

data(golubTrain)

golubTrain

golubTrain[,1:10]

golubTrain[1:100,]

################################################### ### chunk number 3: phenodata ###################################################

pD <- phenoData(golubTrain)

pD

pd <- pData(pD)

pd

################################################### ### chunk number 4: phenodata2 ###################################################

table(pD$ALL.AML)

##different data data(golubTest) table(golubTest$ALL.AML)

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